Portal

Home

Bioinformatics

NCBI

* Pubmed
* Genbank
* Unigene
* Homologene
* Gene
* Genomes
* BLAST
* Taxonomy
* ORF Finder
* FTP

Genome Sites

* Ensembl
* UCSC
* MGI

Tools

* MultAlin
* Queens Univ.
* SMS
* Atlas
* UCSC
* Workbench
* CMS

DNA
* IDT Olico Calc.
* North West. Oligo Calc.
* Net Primer
* MATCH
* TESS
* DRAGON-Promoter/TS
* NEB Cutter

Protein
* ExPASy (SWISSPROT)
* Pan Facility
* Peptide calculator
* PhosphoBase
* ProteinProspector

Other Databases


Nomenclature
* Human
* Mouse
* Rat

Programming

Perl

* Active State
* CPAN
* Perl Monks
* Weizmann Perl course
* Perldoc
* RexSwain Reference Guide

Bash

* Bash scripting guide

Java

* Data Structures
* Java 1.3 API

HTML

* 4.01 spec
* Jim Marshall
* CSS
* Tidy

Color
* Interactive Color
* Theory Basics

Microarray

Laboratory Sites

* Pipas Lab s
* Terry Speed
* Gary Churchill
* Pat Brown
* Joseph DeRisi
* Michael Eisen
* Skip Garner
* Leung Yuk Fai
* EMBL-EBI
* Stanford Database
* Pitt-GPCL

GO Analysis

Onto-Express
DAVID
FatiGO

Design/Analysis

Software
* BRB-ArrayTools
* TIGR
* D-chip
* R-project
* Bioconductor
* SNOMAD

Mining
* GeneKeyDB
* DRAGON
* SOURCE
* RESOURCERER

Papers/Protocols
* MGED
* Rich Simon-NCI
* TIGR protocols

Sequences

PipasLab

* pRSVBneoT (txt)

T antigen

* SV40 Genome
* LTAg DNA/Protein
* AA seq of polyoma TAg's
* SWISS-PROT

Protein Links

* E2F's (h m)
* mE2F3 doc
* DP1 (h m)
* DP2 (h m)
* Rb (h m)
* p107 (h m)
* p130 (h m)
* p53 (h m)

Operating Systems

Linux

* Linux Apps
* Rosetta Stone

Mac OS

* MacOSX Hints
* Filesharing/Printing (Pitt)
* Filesharing (CMU)
* Printing (CMU)

General

University

* Dept of Bio Sci (Eric)
* Med School Seminars
* University of Pittsburgh

Pittsburgh

* News
* Carnegie Library
* Steelers
* Penguins

CurrentWeather

Click for Pittsburgh weather

Misc

* Webster.com
* Jackstargazer.com
* Time

Journals
* University of Pittsburgh E-journals

* Cancer Research
* EMBO
* FEBS Letters
* Genes and Development
* Journal of Biological Chemistry
* Journal of Virology
* Molecular and Cellular Biology
* Nature
* Oncogene
* Proceedings of National Academy of Sciences
* Science
* Virology